発表論文

2017年

Okada M, Yoshida K, Takumi S (2017) Hybrid incompatibilities in interspecific crosses between tetraploid wheat and its wild diploid relative Aegilops umbellulata. Plant Mol Biol
 
Nishijima R, Ikeda T, Takumi S (2017) Genetic mapping reveals a dominant awn-inhibiting gene related to differentiation of the variety anathera in the wild diploid wheat Aegilops tauschii Genetica 
 
Matsuda R, Iehisa JCM, Sakaguchi K, Ohno R, Yoshida K, Takumi S (2017) Global gene expression profiling related to temperature-sensitive growth abnormalities in interspecific crosses between tetraploid wheat and Aegilops tauschii. PLoS ONE 12(5): e0176497. https://doi.org/10.1371/journal.pone.0176497.
 
Yoshioka M, Iehisa JCM, Ohno R, Kimura T, Enoki H, Nishimura S, et al. (2017) Three dominant awnless genes in common wheat: Fine mapping, interaction and contribution to diversity in awn shape and length. PLoS ONE 12(4): e0176148. https://doi.org/10.1371/journal.pone.0176148
 
R. Nishijima, Y. Okamoto, H. Hatano, S. Takumi (2017) Quantitative trait locus analysis for spikelet shape-related traits in wild wheat progenitor Aegilops tauschii: Implications for intraspecific diversification and subspecies differentiation. PLoS ONE 12(3): e0173210. doi:10.1371/journal.pone.0173210
 
Inoue, Y., Vy, TTP., Yoshida, K., Asano, H., Mitsuoka, C., Asuke, S., Anh, VL, Cumagun, CJR., Chuma, I., Terauchi, R., Kato, K., Mitchell, T., Valent, B., Farman, M., and Tosa, Y (2017). Evolution of the wheat blast fungus through functional losses in a host specificity determinant. Science 2017 357:80-83.
 
Belhaj, K., Cano, L. M., Prince, D. C., Kemen, A., Yoshida, K., Dagdas, Y. F., Etherington G. J., Schoonbeek H. J., van Esse, H. P., Jones, J.D, Kamoun, S., and Schornack, S. (2017) Arabidopsis late blight: infection of a nonhost plant by Albugo laibachii enables full colonization by Phytophthora infestans. Cellular Microbiology, 19(1), e12628.
 
Pais, M., Yoshida, K., Giannakopoulou, A., Pel, M.A., Cano, L.M., Oliva, R.F., Witek, K., Lindqvist-Kreuze, H., Vleeshouwers, V.G.A.A., and Kamoun, S. Gene expression polymorphism underpins evasion of host immunity in an asexual lineage of the Irish potato famine pathogen. (2017) bioRxiv, doi: https://doi.org/10.1101/116012.
 
Ayra-Pardo, C., Raymond, B., Gulzar, A., Rodríguez-Caberea, L., de la Noval, CR, Bertot, IM., Ochagavía, ME., Terauchi, R., Yoshida, K., Matsumura, H., Rodríguez, PT., Borrás-Hidalgo, O., and Wright, DJ. (2017) HT-SuperSAGE of the gut tissue of a VIP3A-resistant 1 Heliothis virescens F.(Lepidoptera: Noctuidae) strain provides insights into its evolution and toxin adaptation. Insect Science  in press.
 
 
 
 

2016年

S. Saisho, S. Takumi and Y. Matsuoka (2016) Salt tolerance during germination and seedling growth of wild wheat Aegilops tauschii and its impact on the species range expansion. Scientific Reports 6:38554. 

 

J.C.M. Iehisa, M. Okada, K. Sato and S. Takumi (2017) Detection of splicing variants in the leaf and spike transcripts of wild diploid wheat Aegilops tauschii and transmission of the splicing patterns to synthetic hexaploid wheat. Plant Gene 9: 6-12

 
 H. Yokota, J.C.M. Iehisa, R. Nishijima, M. Nitta, S. Takenaka, S. Nasuda and S. Takumi (2016) Variation in abscisic acid responsiveness at the early seedling stage is related to line differences in seed dormancy and in expression of genes involved in abscisic acid responses in common wheat . Journal of Cereal Science 71: 167-176.    
 

K. Sakaguchi, T. Nishijima, J.C. Iehisa, S. Takumi (2016)  Fine mapping and genetic association analysis of Net2, the causative D-genome locus of low temperature-induced hybrid necrosis in interspecific crosses between tetraploid wheat and Aegilops tauschii. Genetica 144:523-533.

 
Fine mapping and genetic association analysis of Net2, the causative D-genome locus of low temperature-induced hybrid necrosis in interspecific crosses between tetraploid wheat and Aegilops tauschiiFine mapping and genetic association analysis of Net2, the causative D-genome locus of low temperature-induced hybrid necrosis in interspecific crosses between tetraploid wheat and Aegilops tauschii
Fine mapping and genetic association analysis of Net2, the causative D-genome locus of low temperature-induced hybrid necrosis in interspecific crosses between tetraploid wheat and Aegilops tauschii

D. Takagi, S. Takumi, M. Higashiguchi, T. Sejima and C. Miyake (2016) Superoxide and singlet oxygen produced within the thylakoid membranes both cause photosystem I photoinhibition. Plant Physiology 171: 1626-1634.

 
 

K. Yoshida, D.G. Saunders, C. Mitsuoka, S. Natsume, S. Kosugi, H. Saitoh, Y. Inoue, I Chuma, Y. Tosa, L.M. Cano, S. Kamoun, and R. Terauchi (2016) Host specialization of the blast fungus Magnaporthe oryzae is associated with dynamic gain and loss of genes linked to transposable elements. BMC Genomics 17(1):370.

 
 

2015年

 
 
 
A. Chaparro-Garcia, S. Schwizer, J. Sklenar, K. Yoshida, B. Petre, J. Bos, S. Schornack, A.M. Jones, T.O. Bozkurt and S. Kamoun (2015) Phytophthora infestans RXLR-WY Effector AVR3a Associates with Dynamin-Related Protein 2 Required for Endocytosis of the Plant Pattern Recognition Receptor FLS2. PLoS One 10:e0137071. 
 
Y. Sakamoto, K. Nakade, K. Yoshida, S. Natsume, K. Miyazaki, S. Sato, A.F. van Peer and N. Konno (2015) Grouping of multicopper oxidases in Lentinula edodes by sequence similarities and expression patterns. AMB Express 5:63.
 
K. Fujisaki, Y. Abe, A. Ito, H. Saitoh, K. Yoshida, H. Kanzaki, E. Kanzaki, H. Utsushi, T. Yamashita, S. Kamoun and R. Terauchi (2015) Rice Exo70 interacts with a fungal effector, AVR-Pii and is required for AVR-Pii-triggered immunity. Plant Journal 83:875-87
 
F. Kobayashi, S. Katagiri, W. Karasawa, Y. Hanawa, H. Kanamori, Y. Ito, H. Fujisawa, Y. Mukai, T. Tanaka, S. Kaneko, S. Watanabe, T. Sakaguchi, S. Nasuda, K. Hayakawa, C. Abe, R. Ohno, J.C.M. Iehisa, S. Takumi, J. Doležel, Y. Ogihara, T. Matsumoto, Y. Katayose, J. Wu and H. Handa (2015) Development of the BAC physical maps of wheat chromosome 6B for its genomic sequencing. In: Advances in Wheat Genetics: From Genome to Field: Proceedings of the 12th International Wheat Genetics Symposium (eds. Y. Ogihara, S. Takumi and H. Handa), Springer Japan. pp101-107.
 
S. Takumi, R. Matsuda and J.C.M. Iehisa (2015) Association of wheat miRNAs with hybrid incompatibility in interspecific crosses of Triticum and Aegilops. In: Advances in Wheat Genetics: From Genome to Field: Proceedings of the 12th International Wheat Genetics Symposium (eds. Y. Ogihara, S. Takumi and H. Handa), Springer Japan. pp159-165.
 
H. Yokota, J.C.M. Iehisa, E. Shimosaka and S. Takumi (2015) Gene expression profiles involved in development of freezing tolerance in common wheat. In: Advances in Wheat Genetics: From Genome to Field: Proceedings of the 12th International Wheat Genetics Symposium (eds. Y. Ogihara, S. Takumi and H. Handa), Springer Japan. pp247-252.
 
M. Tanaka, H. Tanaka, N, Shitsukawa, S. Kitagawa, S. Takumi and K. Murai (2015) Homoeologous copy-specific expression patterns of MADS-box genes for floral formation in allopolyploid wheat. Genes and Genetic Systems 90: 217-229.
 
 
H. Takagi, M. Tamiru, A. Abe, K. Yoshida, A. Uemura, H. Yaegashi, T. Obara, K. Oikawa, H. Utsushi, E. Kanzaki, C. Mitsuoka, S. Natsume, S. Kosugi, H. Kanzaki, H. Matsumura, N. Urasaki, S. Kamoun, and R. Terauchi (2015) Genomics accelerates breeding of a salt tolerant rice adapted to contaminated paddy fields. Nature Biotechnology 30:174-178
 
V.L. Anh, A.T. Nguyen, A.G Tagle, T.T.P. Vy, Y. Inoue, S. Takumi, I. Chuma and Y. Tosa (2015) Rmg8, a new genefor resistance to Triticum isolates of Pyricularia oryzae in hexaploid wheat. Phytopathology 105: 1568-1572.
 
 
 
 
 
 
 

2014年

 
M. Katkout, M. Kishii, K. Kawaura, K. Mishina, S. Sakuma, K. Umeda, S. Takumi, M. Nitta, S. Nasuda and Y. Ogihara (2014) QTL analysis of genetic loci affecting domestication-related spike characters in common wheat. Genes and Genetic Systems 89: 121-131.
 
 
R. Nishijima, J.C.M. Iehisa, Y. Matsuoka and S. Takumi (2014) The cuticular wax inhibitor locus Iw2 in wild diploid wheat Aegilops tauschii: phenotypic survey, genetic analysis, and implications for the evolution of common wheat. BMC Plant Biology 14: 246. doi:10.1186/s12870-014-0246-y 
 
J.C.M. Iehisa, R. Ohno, T. Kimura, H. Enoki, S. Nishimura, Y. Okamoto, S. Nasuda and S. Takumi (2014) A high-density genetic map with array-based markers facilitates structural and quantitative trait locus analyses of the common wheat genome. DNA Research 21: 555-567. 
 
H. Ueno, N. Urasaki, S. Natsume, K. Yoshida, K. Tarora, A. Shudo, R. Terauchi and H. Matsumura (2014) Genome sequence comparison reveals a candidate gene involved in male– hermaphrodite differentiation in papaya (Carica papaya) trees. Molecular genetics and genomics [Epub ahead of print]
 
S. Natsume, H. Takagi, A. Shiraishi, J. Murata, H. Toyonaga, J. Patzak, M. Takagi, H. Yaegashi, A. Uemura, C. Mitsuoka, K. Yoshida, K. Krofta, H. Satake, R. Terauchi, and E. Ono. (2014)  The Draft Genome of Hop (Humulus lupulus), an Essence for Brewing. Plant Cell Physiol. 2014 Nov 20. [Epub ahead of print]
 
R. Fekih, M. Tamiru, H. Kanzaki, A. Abe, K. Yoshida, E. Kanzaki, H. Saitoh, H. Takagi, S. Natsume, J.R. Undan, J. Undan and R. Terauchi (2014) The rice (Oryza sativa L.) LESION MIMIC RESEMBLING, which encodes an AAA-type ATPase, is implicated in defense response. Molecular genetics and genomics [Epub ahead of print]
 
Y. Matsuoka, S. Takumi and S. Nasuda (2014) Genetic mechanisms of allopolyploid speciation through hybrid genome doubling: novel insights from wheat (Triticum and Aegilops) studies. International Review of Cell and Molecular Biology 309: 199-258.
 
V. Sivankalyani, S. Takumi, S. Thangasamy, K. Ashakiran and S. Girija (2014) Punctured-hypocotyl method for high-efficient transformation and adventitious shoot regeneration of tomato. Scientia Horticulturae 165: 357-364.
 
J.C.M. Iehisa, T. Matsuura, I.C. Mori and S. Takumi (2014) Identification of quantitative trait locus for abscisic acid responsiveness on chromosome 5A and association with dehydration tolerance in common wheat seedlings. Journal of Plant Physiology 171: 25-34.
 
J.C.M. Iehisa, A. Shimizu, K. Sato, R. Nishijima, K. Sakaguchi, R. Matsuda, S. Nasuda and S. Takumi (2014) Genome-wide marker development for the wheat D genome based on single nucleotide polymorphisms identified from transcripts in the wild wheat progenitor Aegilops tauschii. Theoretical and Applied Genetics 127: 261-271.
 
J.C.M. Iehisa, T. Matsuura, I.C. Mori, H. Yokota, F. Kobayashi and S. Takumi (2014) Identification of quantitative trait loci for abscisic acid responsiveness in the D-genome of hexaploid wheat. Journal of Plant Physiology 171: 830-841.
 
貴島祐治, 寺内良平, 高田美信, 宅見薫雄, 藤本龍, 村井耕二 (2014) 育種におけるゲノム・遺伝子相関. 育種学研究 16: 79-85.
 
阿部 陽, 高木 宏樹, 小杉 俊一, 夏目 俊, 八重樫 弘樹, 吉田 健太郎, 寺内 良平 (2014) 育種へ応用する MutMap。 次世代シークエンス解析スタンダード〜NGSのポテンシャルを活かしきるWET&DRY 二階堂愛(編) 羊土社
 

2013年

 
Iehisa, J.C.M., Motomura, Y., Kobayashi, F. and Takumi, S. (2013) Abiotic stress signal network with expression QTLs for cold-responsive genes in common wheat. In: Plant and Microbe Adaptations to Cold in a Changing World: Proceedings of the Plant and Microbe Adaptation to Cold Conference 2012 (eds. Imai, R., Yoshida, M. and Matsumoto, N.), Springer New York, pp219-229.
 
Y. Motomura, F. Kobayashi, J.C.M. Iehisa and S. Takumi (2013) A major quantitative trait locus for cold-responsive gene expression is linked to frost-resistance gene Fr-A2 in common wheat. Breeding Science 63: 58-67.
 
M. Yamamoto, N. Shitsukawa, M. Yamada, S. Takumi, K. Kawaura, Y. Ogihara and K. Murai (2013) Identification of a novel gene for a calmodulin-binding protein that is upregulated in alloplasmic wheat showing pistillody. Planta 237: 1001-1013.
 
A.T. Nguyen, J.C.M. Iehisa, T. Kajimura, K. Murai and S. Takumi (2013) Identification of quantitative trait loci for flowering-related traits in the D genome of synthetic hexaploid wheat lines. Euphytica 192: 401-412.
 
Y. Okamoto and S. Takumi (2013) Pleiotropic effects of the elongated glume gene P1 on grain and spikelet shape-related traits in tetraploid wheat. Euphytica 194: 207-218.
 
Y. Matsuoka, S. Nasuda, Y. Ashida, M. Nitta, H. Tsujimoto, S. Takumi and T. Kawahara (2013) Genetic basis for spontaneous hybrid genome doubling during allopolyploid speciation of common wheat shown by natural variation analyses of the paternal species. PLoS ONE 8: e68310.
 
A.T. Nguyen, J.C.M. Iehisa, N. Mizuno, M. Nitta, S. Nasuda and S. Takumi (2013) Differential contribution of two Ppd-1 homoeoalleles to early-flowering phenotype in Nepalese and Japanese varieties of common wheat. Breeding Science 63: 374-383.
 
Y. Okamoto, A.T. Nguyen, M. Yoshioka, J.C.M. Iehisa and S. Takumi (2013) Identification of quantitative trait loci controlling grain size and shape in the D genome of synthetic hexaploid wheat lines. Breeding Science 63: 423-429.
 
S. Takumi, Y. Motomura, J.C.M. Iehisa and F. Kobayashi (2013) Segregation distortion caused by weak hybrid necrosis in recombinant inbred lines of common wheat. Genetica 141: 463-470.
 

2012年

 
Iehisa, J.C.M. and Takumi, S. (2012) Variation in abscisic acid responsiveness of Aegilops tauschii and hexaploid wheat synthetics due to the D genome diversity. Genes and Genetic Systems 87: 9-18.
 
Kinjo, H., Shitsukawa, N., Takumi, S. and Murai, K. (2012) Diversification of three APETALA1/FLUITFULL-like genes in wheat. Molecular Genetics and Genomics 287: 283-294.
 
Hatano, H., Mizuno, N., Matsuda, R., Shitsukawa, N., Park, P. and Takumi, S. (2012) Dysfunction of mitotic cell division at shoot apices triggered severe growth abortion in interspecific hybrids between tetraploid wheat and Aegilops tauschii. New Phytologist 194: 1143-1154.
 
Koyama, K., Hatano, H., Nakamura, J. and Takumi, S. (2012) Characterization of three VERNALIZATION INSENSITIVE3-like (VIL) homologs in wild wheat, Aegilops tauschii Coss. Hereditas 149: 62-71.
 
Matsuda, R., Iehisa, J.C.M. and Takumi, S. (2012) Application of real-time PCR-based SNP detection for mapping of Net2, a causal D-genome gene for hybrid necrosis in interspecific crosses between tetraploid wheat and Aegilops tauschii. Genes and Genetic Systems 87: 137-143.
 
Iehisa, J.C.M., Shimizu, A., Sato, K., Nasuda, S. and Takumi, S. (2012) Discovery of high-confidence single nucleotide polymorphisms from large-scale de novo analysis of leaf transcripts of Aegilops tauschii, a wild wheat progenitor. DNA Research 19: 487-497.
 
Okamoto, Y., Kajimura, T., Ikeda, T.M. and Takumi, S. (2012) Evidence from principal component analysis for improvement of grain shape- and spikelet morphology-related traits after hexaploid wheat speciation. Genes and Genetic Systems 87: 299-310.
 
Takenouchi, Y., Kanamaru, K. and Takumi, S. (2012) Comparison of three hemA1 cDNA sequences putatively encoding a glutamyl tRNA reductase in common wheat. Wheat Information Service 113: 9-11.
 

2011年

 
Mizumoto, K., Hatano, H., Hirabayashi, C., Murai, K. and Takumi, S. (2011) Characterization of wheat Bell1- type homeobox genes in floral organs of alloplasmic lines with Aegilops crassa cytoplasm. BMC Plant Biology 11: 2. doi:10.1186/1471-2229- 11-2
 
Kajimura, T., Murai, K. and Takumi, S. (2011) Distinct genetic regulation of flowering time and grain- filling period based on empirical study of D genome diversity in synthetic hexaploid wheat lines. Breeding Science 61: 130-141.
 
Mizuno, N., Shitsukawa, N., Hosogi, N., Park, P. and Takumi, S. (2011) Autoimmune response and repression of mitotic cell division occur in inter- specific crosses between tetraploid wheat and Aegilops tauschii Coss. that show low temperature- induced hybrid necrosis. The Plant Journal 68: 114-128.
 
Iehisa, J.C.M., Kurahashi, Y. and Takumi, S. (2011) Identification of chromosomes controlling abscisic acid responsiveness and transcript accumulation of Cor-Lea genes in common wheat seedlings. Functional Plant Biology 38: 758-766.
 
Takumi, S., Koyama, K., Fujiwara, K. and Kobayashi, F. (2011) Identification of a large deletion in the first intron of a Vrn-D1 locus associated with loss of vernalization requirement in wild wheat progenitor Aegilops tauschii Coss. Genes and Genetic Systems 86: 183-195.
 
Takumi, S. and Mizuno, N. (2011) Low temperature- induced necrosis shows phenotypic plasticity in wheat triploid hybrids. Plant Signaling and Behavior 6: 1431-1433.
 
Takenouchi, Y., Nakajima, H., Kanamaru, K. and Takumi, S. (2011) Characterization of three homoeologous cDNAs encoding chloroplast- targeted aminolevulinic acid dehydratase in common wheat. Journal of Integrative Plant Biology 53: 942-950.
 
Mizuno, N. and Takumi, S. (2011) Differential gene expression of two alternative oxidase genes under dehydration stress in common wheat. Wheat Information Service 111: 1-3.
 

2010年

 
Mizuno, N., Yamasaki, M., Matsuoka, Y., Kawahara, T. and Takumi, S. (2010) Population structure of wild wheat progenitor Aegilops tauschii Coss.: implications for intraspecific lineage diversification and evolution of common wheat. Molecular Ecology 19: 999-1013.
 
Kobayashi, F., Takumi, S. and Handa, H. (2010) Identification of quantitative trait loci for ABA responsiveness at seedling stage associated with ABA-regulated gene expression in common wheat. Theoretical and Applied Genetics 121: 629-641.
 
Mizuno, N., Hosogi, N., Park, P. and Takumi, S. (2010) Hypersensitive response-like reaction is associated with hybrid necrosis in interspecific crosses between tetraploid wheat and Aegilops tauschii Coss. PLoS ONE 5(6): e11326. doi:10.1371/journal.pone.0011326
 
Fujiwara, Y., Shimada, S., Takumi, S. and Murai, K. (2010) Differential effects of Aegilops tauschii genotypes on maturing-time in synthetic hexaploid wheats. Breeding Science 60: 286-292.
 
Kajimura, T., Mizuno, N. and Takumi, S. (2010) Utility of leaf senescence-associated gene homologs as developmental markers in common wheat. Plant Physiology and Biochemistry 48: 851-859.
 
Morihiro, H. and Takumi, S. (2010) Natural variation of leaf shape-related traits in wild Einkorn wheat Triticum urartu Thum. Wheat Information Service 109: 1-4.
 
Morihiro, H. and Takumi, S. (2010) Natural variation of trichome density on leaf in wild wheat Aegilops tauschii Coss. Wheat Information Service 110: 11-14.
 

2009年

 
Morimoto, R., Nishioka, E., Murai, K. and Takumi, S. (2009) Functional conservation of wheat orthologs of maize rough sheath1 and rough sheath2. Plant Molecular Biology 69: 273-285.
 
Terashima, A. and Takumi, S. (2009) Allopolyploidization reduces alternative splicing efficiency for transcripts of the wheat DREB2 homolog, WDREB2. Genome 52: 100-105.
 
Takumi, S., Naka, Y., Morihiro, H. and Matsuoka, Y. (2009) Expression of morphological and flowering time variation through allopolyploidization: an empirical study with 27 wheat synthetics and their parental Aegilops tauschii accessions. Plant Breeding 128: 585-590.
 
Matsuoka, Y., Nishioka, E., Kawahara, T. and Takumi, S. (2009) Genealogical analysis of subspecies divergence and spikelet-shape diversification in central Eurasian wild wheat Aegilops tauschii Coss. Plant Systematics and Evolution 279: 233-244.
 
Mizumoto, K., Hatano, H., Hirabayashi, C., Murai, K. and Takumi, S. (2009) Altered expression of wheat AINTEGUMENTA homolog, WANT-1, in pistil and pistil-like transformed stamen of an alloplasmic line with Aegilops crassa cytoplasm. Development, Genes and Evolution 219: 175-187.
 
Shitsukawa, N., Kinjo, H., Takumi, S. and Murai, K. (2009) Heterochronic development of the floret meristem determines grain number per spikelet in diploid, tetraploid and hexaploid wheats. Annals of Botany 104: 243-251.
 
Yamada, K., Saraike, T., Shitsukawa, N., Takumi, S. and Murai, K. (2009) Class D and Bsister MADS-box genes are associated with the ectopic ovule formation in the pistil-like stamens of alloplasmic wheat (Triticum aestivum L.). Plant Molecular Biology 71: 1-14.
 
Kurahashi, Y., Terashima, A. and Takumi, S. (2009) Variation in dehydration tolerance, ABA-sensitivity and related gene expression patterns in D-genome progenitor and synthetic hexaploid wheat lines. International Journal of Molecular Sciences 10: 2733-2751.
 
Takumi, S., Nishioka, E., Morihiro, H., Kawahara, T. and Matsuoka, Y. (2009) Natural variation of morphological traits in a wild wheat progenitor Aegilops tauschii Coss. Breeding Science 59: 579-588.
 
Takumi, S. (2009) Segregation analysis of heading time and its related traits in wheat F2 populations between two Nepal landraces and a Japanese cultivar Shiroganekomugi. Wheat Information Service 107: 5-8.
 
Ishida, Y. and Takumi, S. (2009) Cloning of a wheat cDNA encoding an ortholog of the maize LIGULELESS4 homeobox protein. Wheat Information Service 107: 9-12.
 

2008年

 
Tsunewaki, K., Mori, N. and Takumi, S. (2008) Production of Aegilops cylindrica with Ae. caudata plasmon, to recreate Ae. caudata from its genome and plasmon separated for 60 years. Proc. 11th Int. Wheat Genet. Symp. P070, Sydney University Press.
 
村井耕二, 酒井則良, 安達卓, 宅見薫雄, 山田雅保(2008) 基礎生物学テキストシリーズ5「発生生物学」、中村千春、奥野哲郎、岡田清孝監修、化学同人.
 
Takumi, S., Terashima, A., Kurahashi, Y., Egawa, C. and Kobayashi, F. (2008) Wheat transformation or heterologous transformation? Functional evaluation of wheat abiotic stress-responsive genes and their interaction in transgenic dicot plant. In: Transgenic Plants: New Research, edited by O.T. Chan. (ISBN: 978-1-60692-017-6). pp1-32. Nova Science Publisher, Hauppauge, N.Y.
 
Kobayashi, F., Takumi, S. and Nakamura, C. (2008) Increased freezing tolerance in an ABA- hypersensitive mutant of common wheat. Journal of Plant Physiology 165: 224-232.
 
Mizuno, N., Sugie, A., Kobayashi, F. and Takumi, S. (2008) Mitochondrial alternative pathway is associated with development of freezing tolerance in common wheat. Journal of Plant Physiology 165: 462-467.
 
Takumi, S., Shimamura, C. and Kobayashi, F. (2008) Increased freezing tolerance through up-regulation of downstream genes via the wheat CBF gene in transgenic tobacco. Plant Physiology and Biochemistry 46: 205-211.
 
Kobayashi, F., Ishibashi, M. and Takumi, S. (2008) Transcriptional activation of Cor/Lea genes and increase in abiotic stress tolerance through expression of a wheat DREB2 homolog in transgenic tobacco. Transgenic Research 17: 755-767.
 
Kobayashi, F., Maeta, E., Terashima, A., Kawaura, K., Ogihara, Y. and Takumi, S. (2008) Development of abiotic stress tolerance via a bZIP-type transcription factor LIP19 in common wheat. Journal of Experimental Botany 59: 891-905.
 
Kobayashi, F., Maeta, E., Terashima, A. and Takumi, S. (2008) Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings. Physiologia Plantarum 134: 74-86.
 
Matsuoka, Y., Takumi, S. and Kawahara, T. (2008) Flowering time diversification and dispersal in central Eurasian wild wheat Aegilops tauschii Coss.: genealogical and ecological framework. PLoS ONE 3(9): e3138. doi:10.1371/journal.pone.0003138
 
Zhu, Y., Saraike, T., Yamamoto, Y., Hagita, H., Takumi, S. and Murai, K. (2008) orf260cra, a novel mitochondrial gene, is associated with the homeotic transformation of stamens into pistil-like structures (pistillody) in alloplasmic wheat. Plant and Cell Physiology 49: 1723-1733.
 
Kobayashi, F., Takumi, S. and Handa, H. (2008) Characterization of ABA sensitivity mutants altered abiotic stress tolerance in common wheat. Proc. 11th Int. Wheat Genet. Symp. P184, Sydney University Press.
 
Mizuno, N. and Takumi, S. (2008) Gene expression profiles of hybrid necrosis in synthetic hexaploid wheat. Proc. 11th Int. Wheat Genet. Symp. P273, Sydney University Press.
 
Takumi, S., Mizuno, N., Okumura, Y., Kawahara, T. and Matsuoka, Y. (2008) Two major lineages of Aegilops tauschii Coss. revealed by nuclear DNA variation analysis. Proc. 11th Int. Wheat Genet. Symp. P050, Sydney University Press.
 

2007年

 
Kobayashi, F. and Takumi, S. (2007) Contribution of ABA signal pathways on development of freezing tolerance in wheat. Current Topics in Plant Biology 8: 33-43.
 
Shitsukawa, N., Ikari, C., Shimada, S., Kitagawa, S., Sakamoto, K., Saito, H., Ryuto, H., Fukunishi, N., Abe, T., Takumi, S., Nasuda, S. and Murai, K. (2007) The einkorn wheat (Triticum monococcum) mutant, maintained vegetative phase, is caused by a deletion in the VRN1 gene. Genes and Genetic Systems 82: 167-170.
 
Ishibashi, M., Kobayashi, F., Nakamura, J., Murai, K. and Takumi, S. (2007) Variation of cold/freezing tolerance, Cor/Lea gene expression and vernalization requirement in Japanese common wheat. Plant Breeding 126: 464-469.
 
Sugie, A., Murai, K. and Takumi, S. (2007) Alteration of respiration capacity and transcript accumulation level of alternative oxidase genes in necrosis lines of common wheat. Genes and Genetic Systems 82: 231-239.
 
Shitsukawa, N., Ikari, C., Mitsuya, T., Sakiyama, T., Ishikawa, A., Takumi, S. and Murai, K. (2007) Wheat SOC1 functions independently of WAP1/ VRN1, an integrator of vernalization and photoperiod flowering promotion pathways. Physiologia Plantarum 130: 627-636.
 
Shitsukawa, N., Tahira, C., Nishii, K., Hirabayashi, C., Shimizu, T., Takumi, S., Mochida, K., Kawaura, K., Ogihara, Y. and Murai, K. (2007) Genetic and epigenetic alteration among three homoeologous genes of a class E MADS-box gene in hexaploid wheat. The Plant Cell 19: 1723-1737.
 
Matsuoka, Y., Takumi, S. and Kawahara, T. (2007) Natural variation for fertile triploid F1 formation in allohexaploid wheat speciation. Theoretical and Applied Genetics 115: 509-518.
 
Saraike, T., Shitsukawa, N., Yamamoto, Y., Hagita, H., Iwasaki, Y., Takumi, S. and Murai, K. (2007) Identification of a protein kinase gene associated with pistillody, homeotic transformation of stamens into pistil-like structures, in alloplasmic wheat. Planta 227: 211-221.
 
Takumi, S. and Walbot, V. (2007) Epigenetic silencing and unstable inheritance of MuDR activity monitored at the four bz2-mu alleles in maize (Zea mays L.). Genes and Genetic Systems 82: 387-401.
 
松岡由浩,宅見薫雄 (2007) 栽培植物の遺伝学-雑種形成, 倍数性進化, 多様性. 「生物の科学 遺伝」別冊No.21「日本の遺伝学の潮流」pp.77-78.
 
宅見薫雄 (2007) コムギ倍数化の遺伝機構:再現系を用いた解析. 「生物の科学 遺伝」別冊No.21「日本の遺伝学の潮流」pp.153-156.
 
Mizuno, N., Sugie, A. and Takumi, S. (2007) Production of reactive oxygen species under low temperature condition in seedling leaves of common wheat. Wheat Information Service 104: 21-24.
 
宅見薫雄 (2007) コムギの栽培化とパンコムギの成立:種内分化と異質倍数化による多様性. 蛋白質核酸酵素52(15): 1947-1952.
 

2006年

 
Shimamura, C., Ohno, R., Nakamura, C. and Takumi, S. (2006) Improvement of freezing tolerance in transgenic tobacco plants with a chloroplast-targeting and cold-responsive protein WCOR15 of common wheat. Journal of Plant Physiology 163: 213-219.
 
Egawa, C., Kobayashi, F., Ishibashi, M., Nakamura, T., Nakamura, C. and Takumi, S. (2006) Differential regulation of transcript accumulation and alternative splicing of a DREB2 homolog under abiotic stress conditions in common wheat. Genes and Genetic Systems 81: 77-91.
 
Sugie, A., Naydenov, N., Mizuno, N., Nakamura, C. and Takumi, S. (2006) Overexpression of wheat alternative oxidase gene Waox1a alters respiration capacity and response to reactive oxygen species under low temperature in transgenic Arabidopsis. Genes and Genetic Systems 81: 349-354.
 
Kobayashi, F., Rikiishi, K., Nakamura, C. and Takumi, S. (2006) ABA sensitivity in seedlings of two novel mutants with reduced-dormancy of a common wheat cultivar ‘Norin 61’. Wheat Information Service 101: 4-7.
 

2005年

 
Takumi, S. and Nakamura, C. (2005) Abiotic stress signal pathways associated with development of freezing tolerance after cold acclimation in common wheat. “Frontiers of Wheat Bioscience” edited by Tsunewaki, K. and Nishikawa, K., Wheat Information Service 100: 89-107.
 
Kobayashi, F., Takumi, S., Kume, S., Ishibashi, M., Ohno, R., Murai, K. and Nakamura, C. (2005) Regulation by Vrn-1/Fr-1 chromosomal intervals of CBF- mediated Cor/Lea gene expression and freezing tolerance in common wheat. Journal of Experimental Botany 56: 887-895.
 
Morimoto, R., Kosugi, T., Nakamura, C. and Takumi, S. (2005) Intragenic diversity and functional conservation of the three homoeologous loci of the KN1-type homeobox gene Wknox1 in common wheat. Plant Molecular Biology 57: 907-924.
 
Kume, S., Kobayashi, F., Ishibashi, M., Ohno, R., Nakamura, C. and Takumi, S. (2005) Differential and coordinated expression of Cbf and Cor/Lea genes during long-term cold acclimation in common wheat. Genes and Genetic Systems 80: 185-197.
 
Ogihara, Y., Yamazaki, Y., Murai, K., Kanno, A., Terachi, T., Shiina, T., Miyashita, N., Nasuda, S., Nakamura, C., Mori, N., Takumi, S., Murata, M., Futo, S. and Tsunewaki, K. (2005) Structural dynamics of cereal mitochondrial genomes as revealed by complete nucleotide sequencing of the wheat mitochondrial genome. Nucleic Acids Research 33: 6235-6250.
 

2004年

 
Sharma, P.N., Torii, A., Takumi, S., Mori, N. and Nakamura, C. (2004) Marker construction and marker-assisted pyramiding of two brown planthopper (Nilaparvata lugens Stal) resistance genes Bph1 and Bph2 locating on the long arm of rice chromosome12. Hereditas 140: 61-69.
 
Hashimoto, Z., Mori, N., Kawamura, M., Ishii, T., Yoshida, S., Ikegami, M., Takumi, S. and Nakamura, C. (2004) Genetic diversity and phylogenetic characteristics of Japanese sake-brewing rice as revealed by AFLP and SSRP analyses. Theoretical and Applied Genetics 109: 1586-1596.
 
Hirosawa, S., Takumi, S., Ishii, T., Kawahara, T., Nakamura, C. and Mori, N. (2004) Chloroplast and nuclear DNA variation in common wheat: insight into the origin and evolution of common wheat. Genes and Genetics Systems 79: 271-282.
 
Kobayashi, F., Takumi, S. and Nakamura, C. (2004) Regulation of cold-responsive Cor/Lea genes and their transcription factors by the major freezing tolerance locus Fr-1 in wheat. Recent Research Developments of Plant Science 2: 249-266.
 
Hama, E., Takumi, S., Ogihara, Y. and Murai, K. (2004) Pistillody is caused by alterations of the class B MADS box gene expression pattern in alloplasmic wheats. Planta 218: 712-720.
 
Kobayashi, F., Takumi, S., Nakata, M., Ohno, R., Nakamura, T. and Nakamura, C. (2004) Comparative study on the expression profiles of the Cor/Lea gene family during cold acclimation in two wheat cultivars with contrasting levels of freezing tolerance. Physiologia Plantarum 120: 585-594.
 

 

Mizumoto, K., Murai, K., Nakamura, C. and Takumi, S. (2004) Abundant expression of a wheat HEULLENLOS homolog encoding a mitochondrial L14 ribosomal protein in floral organs of wheat. Gene 343: 281-289.